This is really puzzling. My Chrome bookmarks seem to reorder themselves in random ways. Could it be because I have their names set as blank spaces? (I did this so I'd just see the favicons in the status bar.)
ex. When I went to bed, it was [Google bookmarks folder], weather, facebook, twitter, last.fm...
Now it's [Google bookmarks folder], weather, last.fm, fitocracy, backloggery...
Steam: Mike Danger | PSN/NNID: remadeking | 3DS: 2079-9204-4075
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Question: @Mike Danger -- Do you happen to have Google Sync enabled? I have a suspicion this is related to Chrome syncing with Google Accounts.